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PDBsum entry 5v2c
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Tunnel analysis for: 5v2c calculated with  MOLE 2.0
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PDB id
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5v2c
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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9 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.24 |
1.33 |
69.3 |
-0.75 |
-0.29 |
14.7 |
78 |
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5 |
8 |
5 |
6 |
5 |
1 |
0 |
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CL 603 A DGD 516 C
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2 |
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1.30 |
1.30 |
77.7 |
-0.67 |
-0.27 |
17.1 |
80 |
8 |
8 |
4 |
10 |
3 |
0 |
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CL 603 A DGD 517 C LMG 519 C GOL 524 C LMT 103 J
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3 |
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1.19 |
1.59 |
94.2 |
-0.89 |
-0.14 |
17.6 |
81 |
9 |
8 |
6 |
12 |
4 |
0 |
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CL 603 A GOL 615 A GOL 205 V
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4 |
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1.54 |
1.62 |
21.8 |
-1.09 |
-0.46 |
6.1 |
85 |
2 |
1 |
3 |
3 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program