PDBsum entry 5urm Go to PDB code:  Tunnel analysis for: 5urm calculated with MOLE 2.0 PDB id 5urm Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.43 1.43 20.2 -1.21 0.17 6.5 74 1 4 3 1 4 0 0   2 1.50 2.33 23.5 -0.62 0.47 7.6 77 2 1 3 3 4 0 0   3 1.43 2.93 25.2 -0.58 0.50 8.0 75 2 1 3 3 5 0 0   4 1.48 2.08 16.7 0.20 0.88 7.6 80 1 1 0 4 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.