PDBsum entry 5uo2 Go to PDB code:  Tunnel analysis for: 5uo2 calculated with MOLE 2.0 PDB id 5uo2 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 1.40 38.4 0.42 -0.01 6.1 76 1 1 3 6 4 1 1  HEM 801 A H4B 802 A 2 1.26 1.41 39.0 -0.63 -0.08 12.0 71 3 2 2 4 4 1 0  HEM 801 A H4B 802 A 8J4 803 A 3 1.25 1.41 39.8 0.34 -0.06 6.6 76 1 1 3 6 4 1 1  HEM 801 B H4B 802 B 4 1.23 1.41 46.2 -1.35 -0.22 15.2 77 5 4 5 3 4 1 0  HEM 801 B H4B 802 B 8J4 803 B 5 1.24 1.41 47.0 -1.03 -0.30 14.4 75 4 3 2 4 4 1 0  HEM 801 B H4B 802 B 8J4 803 B 6 1.29 1.29 16.6 -0.31 -0.66 6.4 88 1 1 1 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.