PDBsum entry 5uiy Go to PDB code:  Tunnel analysis for: 5uiy calculated with MOLE 2.0 PDB id 5uiy Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.41 17.8 -2.01 -0.51 19.4 85 3 2 3 0 1 0 0   2 1.25 1.42 18.9 -1.58 -0.63 14.9 82 3 3 3 0 2 2 0   3 1.25 1.40 22.5 -0.72 -0.37 7.3 79 1 4 4 0 4 2 0   4 1.25 1.40 24.6 -2.18 -0.53 22.9 87 4 2 4 0 1 0 0   5 1.25 1.40 38.8 -1.87 -0.47 20.1 86 9 4 7 1 2 0 0   6 1.25 1.41 42.5 -2.09 -0.52 23.0 85 7 7 7 0 2 0 0   7 1.37 1.69 16.9 -0.31 0.18 5.5 71 0 1 3 4 3 2 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.