PDBsum entry 5ugv Go to PDB code:  Tunnel analysis for: 5ugv calculated with MOLE 2.0 PDB id 5ugv Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.37 2.13 21.0 -1.11 -0.37 18.5 76 1 3 0 3 0 2 0   2 1.36 2.10 28.0 -0.96 -0.36 16.9 85 1 4 0 3 0 1 0   3 1.51 1.72 16.0 -1.00 -0.30 18.2 75 1 2 0 2 1 2 0   4 1.50 1.73 22.9 -0.40 -0.20 15.1 83 1 3 0 4 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.