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PDBsum entry 5ugt

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 5ugt calculated with MOLE 2.0 PDB id
5ugt
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.91 1.91 39.6 1.18 0.42 6.6 80 2 2 1 11 4 2 0  NAD 301 G XTW 302 G
2 1.34 1.60 43.3 0.97 0.32 5.5 79 2 2 1 12 4 1 0  NAD 301 E XTW 302 E
3 1.71 1.98 35.9 1.08 0.34 4.8 81 2 1 1 13 3 1 0  NAD 301 A XTW 302 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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