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PDBsum entry 5udw

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Pore analysis for: 5udw calculated with MOLE 2.0 PDB id
5udw
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.46 1.45 27.5 -1.43 -0.59 24.2 80 2 4 1 3 0 1 0  
2 1.93 1.93 52.1 -1.53 -0.30 16.2 83 8 2 6 3 3 1 1  PO4 301 F SO4 304 F
3 1.84 1.84 73.0 -0.81 -0.35 14.7 79 4 6 4 7 3 1 1  PO4 301 E SO4 303 E
4 1.43 1.69 97.2 -1.00 -0.26 16.1 81 8 5 3 7 4 5 1  PO4 301 E SO4 303 E
5 1.57 2.71 101.6 -1.56 -0.34 19.7 83 13 4 4 5 2 5 0  
6 1.62 2.72 102.3 -1.31 -0.27 18.6 80 8 3 3 7 4 5 1  PO4 301 E SO4 303 E
7 2.01 2.00 123.8 -0.78 -0.19 11.9 80 10 2 8 6 7 5 2  PO4 301 E SO4 303 E PO4 301 F SO4 304 F

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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