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PDBsum entry 5udh
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Pore analysis for: 5udh calculated with  MOLE 2.0
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PDB id
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5udh
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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7 pores,
coloured by radius |
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7 pores,
coloured by radius
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7 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.70 |
2.78 |
28.0 |
-2.43 |
-0.33 |
21.1 |
84 |
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6 |
1 |
4 |
1 |
1 |
1 |
0 |
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2 |
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1.35 |
1.36 |
38.8 |
-1.56 |
-0.34 |
14.9 |
83 |
3 |
3 |
4 |
3 |
2 |
0 |
1 |
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3 |
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1.36 |
1.37 |
39.1 |
-1.57 |
-0.38 |
13.8 |
88 |
3 |
3 |
7 |
3 |
1 |
0 |
1 |
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4 |
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1.41 |
1.41 |
42.3 |
-1.44 |
-0.50 |
16.6 |
87 |
3 |
5 |
4 |
2 |
1 |
0 |
0 |
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5 |
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3.68 |
3.75 |
42.6 |
-2.18 |
-0.19 |
26.8 |
80 |
4 |
2 |
3 |
2 |
1 |
1 |
1 |
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6 |
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1.91 |
2.09 |
95.6 |
-2.27 |
-0.57 |
25.3 |
75 |
9 |
5 |
4 |
2 |
3 |
1 |
0 |
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7 |
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1.32 |
1.59 |
97.0 |
-1.69 |
-0.69 |
18.9 |
85 |
6 |
6 |
2 |
5 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program