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PDBsum entry 5u2s
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Pore analysis for: 5u2s calculated with  MOLE 2.0
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PDB id
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5u2s
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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4 pores,
coloured by radius |
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4 pores,
coloured by radius
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4 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.93 |
1.93 |
28.9 |
-1.67 |
0.00 |
27.2 |
91 |
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4 |
0 |
2 |
1 |
0 |
0 |
0 |
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DG 4 D DT 6 P DC 10 P DG 6 T DG 7 T
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2 |
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1.94 |
1.94 |
45.8 |
-0.36 |
-0.10 |
14.8 |
85 |
3 |
0 |
1 |
3 |
0 |
0 |
0 |
ACT 407 A DG 4 D DG 5 D DT 6 P DC 10 P DC 5 T DG
6 T DG 7 T DC 8 T
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3 |
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2.29 |
2.29 |
54.5 |
-0.38 |
-0.24 |
11.3 |
87 |
2 |
0 |
3 |
2 |
0 |
1 |
0 |
ACT 409 A DT 6 P DG 7 P DC 8 P DG 9 P DG 7 T DA
11 T DT 12 T DC 13 T DA 14 T
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4 |
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1.24 |
1.41 |
77.8 |
-1.42 |
-0.28 |
22.3 |
89 |
10 |
3 |
4 |
6 |
1 |
1 |
0 |
1RZ 401 A CA 402 A ACT 410 A NA 412 A DC 8 P DG 9
P DC 10 P DG 9 T DC 10 T DA 11 T DT 12 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program