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PDBsum entry 5ty5

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 5ty5 calculated with MOLE 2.0 PDB id
5ty5
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 1 pore, coloured by radius 1 pore, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.39 138.8 -2.08 -0.41 28.6 73 9 9 3 3 6 1 0  DOD 202 D DOD 225 D DOD 234 D DOD 237 D DOD 241 D
DOD 245 D DOD 250 D DOD 251 D DOD 237 E DOD 253 E
DOD 250 F

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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