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PDBsum entry 5ty5
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Tunnel analysis for: 5ty5 calculated with  MOLE 2.0
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PDB id
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5ty5
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.34 |
4.11 |
20.2 |
1.30 |
0.59 |
1.5 |
60 |
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0 |
0 |
0 |
8 |
3 |
0 |
0 |
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DOD 263 A DOD 250 B DOD 223 C DOD 225 C DOD 227 C
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2 |
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1.12 |
1.12 |
19.8 |
-2.77 |
-0.68 |
38.8 |
76 |
3 |
6 |
0 |
0 |
2 |
0 |
0 |
DOD 227 F DOD 238 F
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3 |
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1.12 |
1.11 |
30.8 |
-1.93 |
-0.27 |
28.6 |
70 |
4 |
6 |
1 |
2 |
6 |
1 |
0 |
DOD 243 F
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4 |
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1.05 |
2.55 |
16.6 |
-0.51 |
-0.01 |
20.5 |
81 |
2 |
3 |
1 |
3 |
0 |
1 |
0 |
DOD 232 A DOD 236 A DOD 234 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program