PDBsum entry 5tkb Go to PDB code:  Pore analysis for: 5tkb calculated with MOLE 2.0 PDB id 5tkb Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   16 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.00 2.87 31.2 -2.75 -0.49 37.1 89 6 5 2 2 0 0 0   2 1.73 1.80 50.5 -2.28 -0.60 27.2 82 6 9 5 3 0 1 0   3 1.76 1.96 54.5 -1.79 -0.41 23.4 79 7 8 5 6 1 1 0   4 1.78 1.82 55.8 -2.33 -0.69 25.9 81 5 9 5 4 0 1 0   5 1.74 1.80 59.1 -2.33 -0.57 31.4 82 9 10 5 4 0 1 0   6 1.39 1.44 63.2 -1.10 -0.35 11.8 91 3 3 8 8 1 1 0  7DJ 807 A 7 2.45 2.49 64.5 -2.20 -0.35 36.0 84 14 13 2 8 0 2 0   8 2.34 2.45 65.3 -2.14 -0.34 35.3 84 14 13 2 8 0 2 0   9 1.95 2.01 78.5 -1.65 -0.49 18.4 85 6 5 8 6 1 0 0   10 1.80 1.82 79.8 -1.92 -0.45 23.2 83 8 9 10 6 1 1 0   11 2.03 2.08 99.9 -2.47 -0.74 21.1 87 6 9 14 5 0 1 0  7DJ 807 A 12 1.59 1.65 122.6 -1.72 -0.42 21.0 83 13 10 9 12 1 2 0  7DJ 705 C 13 1.60 1.65 126.1 -1.53 -0.32 20.8 85 13 10 9 13 1 2 0  7DJ 705 C 14 1.60 1.66 126.6 -1.56 -0.33 20.5 85 13 10 9 13 1 2 0  7DJ 705 C 15 1.31 1.38 172.9 -1.83 -0.61 17.4 86 8 11 19 13 1 1 0   16 1.57 1.60 172.8 -2.26 -0.61 19.9 86 12 10 19 9 2 1 0  7DJ 705 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.