PDBsum entry 5t7h

Pore analysis for: 5t7h calculated with

MOLE 2.0

PDB id

5t7h

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

2 pores, coloured by radius

13 pores, coloured by radius

13 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.94

2.94

30.3

1.54

0.45

2.0

79

0

1

2

6

4

1

1

HEC 205 A

2

1.28

1.27

31.6

0.99

0.40

1.4

77

0

0

4

4

6

0

1

ZE7 203 C HEC 204 C HEC 203 D

3

1.78

1.96

33.4

0.77

0.57

2.6

72

2

0

2

4

7

0

1

ZE7 203 C HEC 204 C HEC 203 D

4

1.84

3.01

36.3

1.10

0.56

1.8

73

1

0

1

8

6

1

1

HEC 205 A HEC 205 B

5

1.27

1.28

36.8

-0.14

0.03

4.5

75

1

1

4

4

5

1

1

ZE7 203 C HEC 204 C

6

1.79

3.00

37.0

0.02

0.40

5.0

68

2

1

1

5

5

2

1

ZE7 204 B HEC 205 B

7

1.77

1.97

38.6

-0.26

0.17

6.0

70

3

1

2

4

6

1

1

ZE7 203 C HEC 204 C

8

1.79

3.04

41.3

1.46

0.78

1.1

72

1

0

1

8

8

1

1

HEC 205 A HEC 205 B

9

1.25

1.38

58.9

0.74

0.57

7.1

75

4

1

1

9

8

1

1

ZE7 204 A HEC 205 A HEC 205 B

10

1.22

1.38

62.0

0.28

0.32

7.4

77

4

1

3

9

6

1

1

ZE7 204 A HEC 205 A HEC 205 B

11

1.25

1.39

66.2

0.50

0.44

8.1

75

4

2

3

7

6

2

1

ZE7 204 A HEC 205 A

12

1.69

1.92

67.4

0.60

0.47

6.7

74

6

1

1

10

8

2

1

ZE7 204 A HEC 205 A HEC 205 B

13

1.22

1.38

72.0

0.53

0.66

6.2

72

5

1

2

9

10

2

0

ZE7 204 A HEC 205 A ZE7 204 B HEC 205 B

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.