spacer
spacer

PDBsum entry 5t6h

Go to PDB code: 
Top Page protein ligands tunnels links
Tunnel analysis for: 5t6h calculated with MOLE 2.0 PDB id
5t6h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
0 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.16 1.15 25.4 -0.78 -0.35 12.9 79 0 3 3 3 1 1 0  
2 1.27 1.41 29.5 0.26 -0.06 4.7 88 1 1 2 7 1 0 0  MYA 501 A
3 1.28 1.40 31.4 0.00 -0.18 6.7 77 0 3 1 5 3 0 0  75Q 502 A
4 1.26 1.41 41.1 0.17 0.13 9.4 75 1 3 2 5 6 0 0  75Q 502 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer