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PDBsum entry 5sw4
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Pore analysis for: 5sw4 calculated with  MOLE 2.0
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PDB id
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5sw4
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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9 pores,
coloured by radius |
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17 pores,
coloured by radius
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17 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.43 |
1.65 |
41.0 |
-1.54 |
-0.54 |
17.9 |
79 |
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4 |
5 |
2 |
4 |
2 |
1 |
0 |
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2 |
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1.25 |
1.50 |
41.8 |
-0.50 |
-0.05 |
13.0 |
85 |
4 |
3 |
2 |
7 |
1 |
1 |
0 |
PO4 803 B TRS 805 B
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3 |
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2.20 |
2.19 |
43.1 |
-0.28 |
-0.34 |
9.9 |
88 |
3 |
0 |
1 |
7 |
1 |
0 |
0 |
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4 |
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1.40 |
1.63 |
47.9 |
-1.08 |
-0.42 |
15.1 |
85 |
4 |
5 |
3 |
6 |
2 |
1 |
0 |
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5 |
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1.19 |
1.34 |
49.6 |
-1.01 |
-0.05 |
12.6 |
64 |
5 |
0 |
2 |
6 |
6 |
2 |
0 |
MPD 804 B
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6 |
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1.35 |
1.58 |
51.2 |
-0.51 |
-0.12 |
12.5 |
85 |
5 |
2 |
2 |
10 |
2 |
1 |
0 |
PO4 804 A TRS 807 A
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7 |
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1.25 |
1.49 |
62.2 |
-0.90 |
-0.27 |
15.1 |
84 |
6 |
5 |
2 |
5 |
1 |
1 |
0 |
PO4 803 B
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8 |
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1.25 |
1.49 |
71.1 |
-1.00 |
-0.20 |
19.5 |
90 |
6 |
6 |
6 |
9 |
2 |
1 |
0 |
PO4 804 A TRS 807 A PO4 803 B
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9 |
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2.34 |
3.60 |
73.4 |
-0.70 |
-0.11 |
18.1 |
88 |
5 |
7 |
6 |
13 |
2 |
2 |
0 |
PO4 804 A TRS 807 A PO4 803 B
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10 |
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2.50 |
2.49 |
75.4 |
-0.36 |
-0.08 |
8.3 |
78 |
2 |
2 |
3 |
10 |
3 |
4 |
0 |
PO4 804 A TRS 807 A MPD 804 B
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11 |
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1.32 |
1.57 |
82.5 |
-1.20 |
-0.29 |
20.9 |
88 |
9 |
7 |
6 |
10 |
2 |
1 |
0 |
PO4 803 B
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12 |
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1.99 |
2.08 |
88.3 |
-1.04 |
-0.27 |
19.6 |
87 |
6 |
7 |
6 |
11 |
2 |
2 |
0 |
PO4 804 A TRS 807 A PO4 803 B
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13 |
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1.31 |
1.51 |
95.2 |
-0.74 |
-0.15 |
12.6 |
80 |
8 |
4 |
2 |
10 |
4 |
3 |
0 |
PO4 804 A MPD 804 B
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14 |
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1.31 |
1.55 |
97.4 |
-1.35 |
-0.42 |
21.0 |
88 |
10 |
7 |
6 |
8 |
2 |
1 |
0 |
PO4 803 B
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15 |
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1.27 |
1.49 |
108.6 |
-1.29 |
-0.32 |
18.6 |
84 |
7 |
6 |
6 |
9 |
4 |
3 |
0 |
PO4 804 A PO4 803 B MPD 804 B
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16 |
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2.43 |
3.47 |
108.6 |
-0.98 |
-0.22 |
17.0 |
84 |
6 |
6 |
6 |
14 |
4 |
4 |
0 |
PO4 804 A PO4 803 B MPD 804 B
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17 |
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1.22 |
1.30 |
189.8 |
-1.64 |
-0.35 |
19.6 |
78 |
14 |
9 |
5 |
13 |
4 |
8 |
0 |
HEM 801 B MPD 804 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program