spacer
spacer

PDBsum entry 5rmh

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5rmh calculated with MOLE 2.0 PDB id
5rmh
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.37 3.39 30.8 -1.53 -0.53 16.7 84 2 2 2 3 0 3 0  
2 1.39 1.60 34.4 -1.17 -0.46 10.6 84 2 2 5 5 1 3 0  
3 2.56 2.80 42.0 -1.23 -0.28 16.6 91 7 2 5 6 0 2 0  
4 2.76 3.01 42.6 -1.26 -0.29 18.5 93 6 1 5 6 0 1 0  
5 1.70 2.13 65.8 -1.63 -0.50 15.3 87 7 2 8 6 2 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer