PDBsum entry 5rkf Go to PDB code:  Tunnel analysis for: 5rkf calculated with MOLE 2.0 PDB id 5rkf Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.87 1.90 16.8 0.07 0.28 2.7 86 0 1 3 1 3 1 0  UVY 1501 A 2 1.46 1.46 18.3 0.77 0.42 2.2 74 0 1 2 5 4 3 0  UVY 1501 A 3 1.27 1.38 15.5 2.42 0.74 4.1 73 2 0 2 7 2 0 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.