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PDBsum entry 5ql5

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 5ql5 calculated with MOLE 2.0 PDB id
5ql5
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.34 32.2 -1.27 -0.38 20.6 71 2 5 1 1 3 2 1  
2 1.69 1.86 36.8 -1.25 -0.37 12.6 75 2 1 3 3 1 1 0  
3 1.30 1.30 41.6 -0.79 -0.31 7.6 75 0 3 4 4 3 3 0  
4 1.29 1.29 46.6 -1.43 -0.46 15.9 75 3 5 4 2 3 2 1  
5 1.69 1.85 55.3 -1.90 -0.51 15.4 82 4 1 6 2 0 2 0  
6 1.31 1.61 59.9 -1.44 -0.42 16.7 78 4 5 4 4 2 2 0  
7 1.30 1.30 60.4 -1.17 -0.44 8.9 82 3 3 8 3 2 4 0  
8 1.28 1.28 95.1 -1.49 -0.48 14.1 77 3 2 4 5 1 2 0  
9 1.29 1.30 113.6 -1.92 -0.56 16.4 82 5 2 7 4 0 3 0  
10 1.34 1.40 118.2 -1.61 -0.50 17.0 79 5 6 5 6 2 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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