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PDBsum entry 5q0c
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Pore analysis for: 5q0c calculated with  MOLE 2.0
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PDB id
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5q0c
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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13 pores,
coloured by radius |
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7 pores,
coloured by radius
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7 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.76 |
1.76 |
25.6 |
-0.35 |
-0.39 |
9.4 |
85 |
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4 |
0 |
1 |
3 |
1 |
0 |
0 |
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96G 401 E 96G 401 G
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2 |
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2.09 |
2.09 |
41.8 |
-0.67 |
-0.43 |
11.3 |
83 |
4 |
0 |
2 |
3 |
1 |
0 |
0 |
96G 401 G
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3 |
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1.34 |
3.79 |
73.1 |
0.11 |
0.14 |
15.9 |
74 |
7 |
4 |
0 |
17 |
3 |
0 |
0 |
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4 |
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1.43 |
1.58 |
88.6 |
-2.07 |
-0.67 |
22.8 |
82 |
7 |
7 |
9 |
3 |
0 |
0 |
1 |
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5 |
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1.63 |
3.33 |
167.8 |
-0.61 |
-0.16 |
16.7 |
77 |
13 |
4 |
2 |
17 |
2 |
0 |
0 |
96G 401 F
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6 |
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1.54 |
2.85 |
211.3 |
-1.10 |
-0.34 |
18.6 |
79 |
13 |
11 |
3 |
14 |
3 |
0 |
0 |
96G 401 E
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7 |
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1.48 |
1.59 |
97.5 |
-2.24 |
-0.40 |
27.1 |
82 |
5 |
7 |
5 |
3 |
3 |
0 |
0 |
FDP 402 H
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program