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PDBsum entry 5phh

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Tunnel analysis for: 5phh calculated with MOLE 2.0 PDB id
5phh
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.29 2.11 24.3 -2.04 -0.18 21.5 83 4 3 3 3 3 0 0  NI 402 A OGA 403 A EDO 409 A
2 1.30 2.10 27.9 -1.83 -0.03 22.7 81 6 2 2 4 3 0 0  NI 402 A OGA 403 A EDO 409 A
3 1.30 1.31 44.7 -1.91 -0.26 19.5 83 4 5 5 4 4 0 0  NI 402 A OGA 403 A EDO 409 A
4 1.30 1.31 51.3 -1.96 -0.42 20.9 85 6 4 5 4 3 0 0  NI 402 A OGA 403 A EDO 409 A LDP 414 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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