spacer
spacer

PDBsum entry 5oz7

Go to PDB code: 
Top Page protein tunnels links
Tunnel analysis for: 5oz7 calculated with MOLE 2.0 PDB id
5oz7
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.42 1.42 18.8 -1.14 -0.50 18.1 84 0 5 1 3 2 0 0  
2 1.41 1.41 19.9 -1.05 -0.49 17.6 87 0 4 1 2 3 0 0  
3 1.41 1.41 30.5 -0.20 -0.04 12.8 79 0 5 0 7 5 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer