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PDBsum entry 5osc

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5osc calculated with MOLE 2.0 PDB id
5osc
Pores calculated on whole structure Pores calculated excluding ligands

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16 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.36 2.40 39.2 -0.74 -0.38 15.6 85 3 4 2 3 1 1 0  
2 1.15 2.11 41.1 -1.99 -0.70 29.6 86 3 7 3 4 0 1 0  
3 1.37 2.13 42.9 -1.51 -0.54 25.6 80 2 7 1 3 1 1 0  
4 2.00 2.94 51.5 -1.41 -0.54 22.1 82 0 9 1 4 1 3 0  ACT 502 B
5 1.20 1.42 89.6 -0.08 -0.18 6.8 84 3 3 4 13 2 6 0  
6 1.23 1.19 130.9 -0.53 -0.17 8.9 82 6 5 6 13 6 6 0  
7 1.95 2.92 131.2 -1.29 -0.54 23.0 83 2 14 2 8 2 4 0  ACT 502 E
8 2.17 3.59 141.3 -0.98 -0.33 15.7 86 10 10 7 13 0 5 0  ACT 502 E
9 1.18 1.41 146.3 -1.99 -0.63 27.8 81 5 22 3 8 2 4 0  ACT 502 B ACT 502 E
10 1.58 3.77 150.2 -0.98 -0.33 16.2 85 9 12 7 14 1 6 0  
11 1.39 2.26 152.8 -1.66 -0.61 28.0 81 4 20 2 9 2 4 0  ACT 502 B ACT 502 E
12 1.19 1.36 152.8 -1.94 -0.58 25.9 82 8 17 5 8 4 4 0  ACT 502 E
13 1.20 1.41 163.6 -1.63 -0.55 23.7 84 7 13 4 8 3 1 0  ACT 502 E
14 1.19 1.19 258.6 -2.35 -0.58 27.6 82 16 19 11 7 8 4 0  ACT 502 E
15 1.30 1.41 273.8 -2.27 -0.55 26.9 83 18 15 11 7 8 2 0  ACT 502 E

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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