PDBsum entry 5ort Go to PDB code:  Tunnel analysis for: 5ort calculated with MOLE 2.0 PDB id 5ort Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 2.14 21.0 0.30 -0.11 10.0 76 1 2 2 6 1 0 0  ADP 401 A 2 1.31 2.06 23.1 0.44 0.08 12.9 73 2 2 2 7 1 0 0  ADP 401 A 3 1.32 2.15 23.3 -0.68 -0.28 17.4 75 3 3 2 6 0 0 0  ADP 401 A MG 402 A 4 1.31 2.16 36.8 -0.89 -0.17 19.1 72 3 4 2 8 2 0 0  ADP 401 A MG 402 A 5 1.19 1.20 39.5 -0.31 -0.07 19.3 74 3 4 3 9 1 0 0  ADP 401 A MG 402 A MG 403 A A5Z 406 A 6 1.31 1.57 19.8 1.84 0.68 7.0 71 1 1 0 4 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.