PDBsum entry 5omh

Transferase

PDB id: 5omh

Contents

Protein chain

325 a.a.

Ligands

9Y5

Waters ×7

References listed in PDB file

Key reference

• Title: Co-Crystal structure determination and cellular evaluation of 1,4-Dihydropyrazolo[4,3-C] [1,2] benzothiazine 5,5-Dioxide p38α mapk inhibitors.
• Authors: D.Bartolini, M.Bührmann, M.L.Barreca, G.Manfroni, V.Cecchetti, D.Rauh, F.Galli.
• Ref.: Biochem Biophys Res Commun, 2019, 511, 579-586. [DOI no: 10.1016/j.bbrc.2019.02.063]
• PubMed id: 30824186

Abstract

p38α mitogen-activated protein kinase (MAPK) is an attracting pharmacological target in inflammatory diseases and cancer. Searching for new and more efficient p38-MAPK inhibitors, two recently developed pyrazolobenzothiazine-based (COXP4M12 and COXH11) compounds were investigated in this study using a cellular model of p38 activation. This consisted of HT29 human colorectal adenocarcinoma cells exposed to H₂O₂ or lipopolysaccharide (LPS). Immunoblot data confirmed the inhibitory effect of COXP4M12 and COXH11 on p38 substrate phosphorylation (MAPK-APK2 and ATF2 transcription factor). Compound cytotoxicity was very low and apparent efficacy of these inhibitors was comparable with that of SB203580, a commercially available type I inhibitor of p38. All these compounds also inhibit upstream kinases that promote p38-MAPK phosphorylation and co-activate the stress-activated protein kinase JNK, while ERK1/2 MAPK phosphorylation was unaffected. Compound-target kinase interaction was investigated by means of co-crystallization experiments that provided further structural and molecular insight on the inhibitory mechanism and optimization strategy of this new class of p38-MAPK inhibitors.