PDBsum entry 5omf Go to PDB code:  Tunnel analysis for: 5omf calculated with MOLE 2.0 PDB id 5omf Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 1.33 39.4 -1.14 -0.52 16.7 75 4 2 0 1 1 0 0  EDO 803 A DA 5 P DC 6 P DG 7 P DG 8 P DG 8 T DC 9 T DC 10 T DG 11 T DT 12 T DG 13 T DG 14 T DT 15 T 2 1.22 1.66 18.6 -0.54 -0.04 17.1 58 1 2 0 1 4 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.