PDBsum entry 5ojm Go to PDB code:  Pore analysis for: 5ojm calculated with MOLE 2.0 PDB id 5ojm Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   11 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 1.31 40.0 0.98 0.05 1.1 86 0 0 0 12 1 6 0   2 1.51 1.82 39.8 -0.06 -0.09 4.8 85 2 1 7 7 3 1 0   3 1.32 1.33 40.7 1.02 0.06 1.1 86 0 0 0 12 1 6 0   4 1.26 1.80 49.7 -0.16 -0.05 3.9 88 2 0 9 8 3 1 0   5 1.31 1.32 50.2 -0.65 -0.43 2.4 99 1 0 15 5 1 1 0   6 1.31 1.87 54.2 -0.27 -0.06 4.6 88 3 1 9 7 2 1 0   7 1.29 1.47 57.7 0.11 -0.18 1.6 94 0 0 10 8 2 2 0   8 2.18 3.79 60.3 0.34 -0.15 1.6 94 1 0 15 12 0 5 0   9 1.31 1.55 61.6 -0.67 -0.35 2.3 98 1 0 15 7 1 1 0   10 1.27 1.98 92.1 -1.19 -0.15 12.0 86 7 3 13 8 5 1 0  NAG 1 G 11 1.48 3.02 91.2 -2.06 -0.45 22.4 88 8 4 7 4 3 0 0  NAG 1 F NAG 2 F 12 1.26 2.01 100.2 0.23 -0.08 4.9 86 5 2 4 14 2 6 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.