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PDBsum entry 5ohy

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5ohy calculated with MOLE 2.0 PDB id
5ohy
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.18 3.35 34.7 -1.61 -0.49 22.7 86 4 4 2 2 0 1 0  
2 3.43 3.57 47.2 -1.61 -0.43 23.1 87 6 4 2 4 0 2 0  
3 2.81 2.83 87.0 -1.12 -0.50 21.1 89 4 10 3 11 0 1 0  
4 2.82 2.86 99.1 -1.20 -0.50 21.0 90 6 9 3 13 0 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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