PDBsum entry 5oef Go to PDB code:  Pore analysis for: 5oef calculated with MOLE 2.0 PDB id 5oef Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   15 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.87 2.49 50.6 -2.26 -0.56 26.2 83 6 4 4 1 0 0 0   2 1.41 1.76 51.7 -2.92 -0.57 31.1 83 9 6 5 1 2 0 0   3 1.39 1.67 62.6 -2.28 -0.54 24.5 80 8 5 6 3 3 0 0   4 3.01 3.01 63.7 -2.21 -0.65 28.4 85 8 9 4 2 1 0 0  MG 609 B 5 2.04 2.10 65.1 -2.19 -0.70 22.8 86 6 7 6 3 0 0 0   6 1.48 1.62 64.9 -2.03 -0.54 21.3 79 7 5 6 3 3 0 1  MG 609 B 7 1.84 2.14 86.6 -2.25 -0.55 27.3 82 7 8 6 5 1 1 0   8 1.43 1.68 89.8 -2.37 -0.42 26.7 79 13 6 8 5 3 1 0   9 1.39 1.65 94.6 -2.14 -0.42 25.7 77 13 7 8 6 4 1 0   10 1.95 2.02 99.4 -1.76 -0.56 16.8 84 11 7 8 6 0 0 0  MG 609 B 11 1.81 2.17 104.4 -1.82 -0.48 21.3 80 10 8 8 8 1 1 0   12 1.75 2.61 119.8 -1.90 -0.52 20.5 80 13 8 9 8 1 1 0   13 1.85 2.16 122.3 -1.94 -0.49 20.3 82 13 8 9 8 1 1 0  MG 609 B 14 1.20 2.01 130.3 -1.10 -0.26 17.3 81 12 10 9 16 2 1 0   15 1.89 2.32 139.8 -1.95 -0.46 21.8 78 14 9 10 10 2 2 0   16 1.21 1.21 149.8 -1.14 -0.26 17.3 81 15 9 9 16 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.