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PDBsum entry 5oal

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Signaling protein PDB id
5oal
Contents
Protein chains
(+ 9 more) 206 a.a.
Ligands
SY9 ×15
ARG

References listed in PDB file
Key reference
Title Engineering a surrogate human heteromeric α/β glycine receptor orthosteric site exploiting the structural homology and stability of acetylcholine-Binding protein.
Authors A.Dawson, P.Trumper, J.O.De souza, H.Parker, M.J.Jones, T.G.Hales, W.N.Hunter.
Ref. IUCrJ, 2019, 6, 1014-1023. [DOI no: 10.1107/S205225251901114X]
PubMed id 31709057
Abstract
Protein-engineering methods have been exploited to produce a surrogate system for the extracellular neurotransmitter-binding site of a heteromeric human ligand-gated ion channel, the glycine receptor. This approach circumvents two major issues: the inherent experimental difficulties in working with a membrane-bound ion channel and the complication that a heteromeric assembly is necessary to create a key, physiologically relevant binding site. Residues that form the orthosteric site in a highly stable ortholog, acetylcholine-binding protein, were selected for substitution. Recombinant proteins were prepared and characterized in stepwise fashion exploiting a range of biophysical techniques, including X-ray crystallography, married to the use of selected chemical probes. The decision making and development of the surrogate, which is termed a glycine-binding protein, are described, and comparisons are provided with wild-type and homomeric systems that establish features of molecular recognition in the binding site and the confidence that the system is suited for use in early-stage drug discovery targeting a heteromeric α/β glycine receptor.
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