PDBsum entry 5oaf Go to PDB code:  Pore analysis for: 5oaf calculated with MOLE 2.0 PDB id 5oaf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 2.04 26.9 -1.48 -0.73 19.2 93 0 3 3 2 0 0 0   2 4.46 5.42 34.2 -3.03 -0.74 20.5 81 4 2 7 2 0 1 0   3 1.18 3.33 39.3 0.37 0.26 13.7 78 2 4 1 8 2 0 0   4 1.16 1.17 43.8 0.55 0.24 8.7 80 3 0 4 9 1 0 0   5 1.28 1.51 52.6 -0.09 -0.07 11.5 87 3 3 5 9 0 0 0   6 1.26 1.26 52.9 -0.16 0.10 13.4 81 3 3 6 10 1 1 0   7 1.47 2.84 68.9 0.95 0.32 10.4 82 1 3 4 12 2 1 0   8 2.75 3.93 83.1 -1.94 -0.43 15.8 80 5 5 11 7 2 1 0   9 2.46 2.50 83.0 -1.29 -0.32 14.7 82 5 4 9 6 3 2 0   10 2.14 2.15 89.3 -1.02 -0.32 16.2 84 3 5 7 7 3 1 0   11 1.26 1.38 121.8 -0.94 -0.21 22.2 86 8 7 7 13 1 0 0   12 1.42 2.07 135.6 -0.82 -0.37 16.1 79 9 13 6 10 2 4 0   13 1.31 1.71 136.9 -1.04 -0.44 17.1 80 9 12 6 9 0 4 0   14 1.39 2.40 167.5 -0.72 -0.28 16.5 80 8 15 8 14 3 4 0   15 1.23 1.31 179.1 -1.15 -0.41 18.1 81 8 14 11 13 2 4 0   16 1.32 1.92 187.6 -1.25 -0.53 17.1 85 7 12 8 10 1 4 0   17 1.55 1.55 188.1 -1.26 -0.41 19.1 82 15 14 10 17 1 4 0   18 2.19 2.77 220.0 -1.19 -0.35 19.1 82 15 15 12 21 2 4 0   19 1.18 1.13 260.0 -0.63 -0.21 17.2 81 17 16 11 20 3 4 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.