PDBsum entry 5o3v Go to PDB code:  Pore analysis for: 5o3v calculated with MOLE 2.0 PDB id 5o3v Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   24 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.78 1.95 31.3 -1.04 -0.43 16.9 85 4 3 2 5 0 1 0   2 3.45 4.23 34.6 -1.14 0.14 15.0 73 6 3 2 5 2 4 0   3 1.28 1.47 62.4 -1.99 -0.55 26.3 79 7 7 4 3 1 2 0   4 1.18 2.56 66.1 -1.13 -0.15 18.9 77 9 4 3 5 4 2 0   5 1.14 2.43 70.1 -1.27 -0.12 21.1 77 10 6 3 5 6 1 0   6 1.63 1.73 70.4 -1.44 -0.47 18.6 87 8 8 4 5 2 1 0   7 1.68 1.96 71.5 -1.46 -0.48 17.2 83 7 6 5 6 2 2 1   8 1.44 1.58 101.4 -1.47 -0.38 24.5 83 11 9 5 7 2 1 1   9 1.26 1.51 101.9 -2.05 -0.57 25.4 79 9 9 6 4 1 3 0   10 1.28 1.58 116.4 -1.34 -0.51 19.1 83 6 6 7 4 2 1 0   11 1.48 1.50 121.2 -1.77 -0.43 26.6 82 21 15 6 10 4 0 0   12 1.39 1.39 122.9 -2.06 -0.61 26.7 84 13 10 8 5 1 0 0   13 1.24 1.65 131.7 -1.83 -0.56 20.6 83 9 8 9 5 2 2 0   14 1.31 1.33 136.2 -1.54 -0.32 22.1 80 20 11 7 11 7 1 0   15 1.26 1.52 143.8 -1.64 -0.41 24.8 80 18 13 6 7 5 1 0   16 1.35 1.36 153.7 -1.36 -0.33 19.3 79 16 8 8 8 6 2 0   17 1.32 1.95 166.3 -1.66 -0.48 22.0 83 18 12 9 7 5 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.