PDBsum entry 5o1b Go to PDB code:  Tunnel analysis for: 5o1b calculated with MOLE 2.0 PDB id 5o1b Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.18 3.59 15.3 1.07 0.17 2.6 74 0 1 0 4 1 2 1  9H2 402 A 2 1.79 1.82 17.5 0.66 -0.06 6.3 80 0 2 1 6 1 0 1  9H2 402 A 3 1.10 2.53 17.1 0.02 0.09 12.1 82 2 1 1 5 1 1 0   4 1.10 1.94 28.3 1.77 0.70 1.1 69 0 0 1 6 4 1 2   5 1.11 1.71 31.3 1.13 0.46 4.5 70 2 0 1 6 5 1 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.