PDBsum entry 5o0h

Pore analysis for: 5o0h calculated with

MOLE 2.0

PDB id

5o0h

Pores calculated on whole structure

Pores calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

4 pores, coloured by radius

6 pores, coloured by radius

6 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.33

1.96

36.2

-1.02

-0.11

4.6

89

0

2

3

1

3

0

0

2

1.67

1.68

36.4

0.30

-0.08

3.2

78

1

0

3

2

2

1

0

3

1.33

1.95

39.7

-0.60

0.01

9.5

82

1

2

2

3

2

1

0

9FN 201 C

4

1.33

1.33

45.8

-1.41

-0.36

14.1

88

3

3

3

2

4

0

0

5

2.32

2.39

53.9

-0.82

0.10

11.8

81

1

4

6

5

4

1

0

9FN 201 C

6

1.34

1.34

56.9

-1.51

-0.28

16.1

89

3

5

6

3

4

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.