PDBsum entry 5o08 Go to PDB code:  Tunnel analysis for: 5o08 calculated with MOLE 2.0 PDB id 5o08 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.71 1.73 31.1 -1.95 -0.44 15.9 93 4 2 5 1 1 0 0  COD 201 B 2 1.65 1.83 39.2 -1.76 -0.44 19.9 93 3 3 7 2 1 0 0  COD 201 B 3 1.72 1.74 46.7 -1.57 -0.34 14.8 93 6 2 5 3 1 0 0  COD 201 B 4 1.61 2.35 51.8 -1.45 -0.41 13.1 91 5 3 8 2 2 0 0  COD 201 B 5 1.27 1.28 69.7 -1.05 -0.22 13.8 85 7 5 7 6 3 1 0  COD 201 A COD 201 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.