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PDBsum entry 5nib

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Rar-related orphan receptor-g (rorg) PDB id
5nib
Contents
Protein chain
252 a.a.
Ligands
LYS-ILE-LEU-HIS-
ARG-LEU-LEU-GLN-
ASP-SER
8Y5
DMS
Metals
_NA
Waters ×176

References listed in PDB file
Key reference
Title Potent and orally bioavailable inverse agonists of rorγt resulting from structure-Based design.
Authors F.Narjes, Y.Xue, S.Von berg, J.Malmberg, A.Llinas, R.I.Olsson, J.Jirholt, H.Grindebacke, A.Leffler, N.Hossain, M.Lepistö, L.Thunberg, H.Leek, A.Aagaard, J.Mcpheat, E.L.Hansson, E.Bäck, S.Tångefjord, R.Chen, Y.Xiong, G.Hongbin, T.G.Hansson.
Ref. J Med Chem, 2018, 61, 7796-7813. [DOI no: 10.1021/acs.jmedchem.8b00783]
PubMed id 30095900
Abstract
Retinoic acid receptor related orphan receptor γt (RORγt), has been identified as the master regulator of TH17-cell function and development, making it an attractive target for the treatment of autoimmune diseases by a small-molecule approach. Herein, we describe our investigations on a series of 4-aryl-thienyl acetamides, which were guided by insights from X-ray cocrystal structures. Efforts in targeting the cofactor-recruitment site from the 4-aryl group on the thiophene led to a series of potent binders with nanomolar activity in a primary human-TH17-cell assay. The observation of a DMSO molecule binding in a subpocket outside the LBD inspired the introduction of an acetamide into the benzylic position of these compounds. Hereby, a hydrogen-bond interaction of the introduced acetamide oxygen with the backbone amide of Glu379 was established. This greatly enhanced the cellular activity of previously weakly cell-active compounds. The best compounds combined potent inhibition of IL-17 release with favorable PK in rodents, with compound 32 representing a promising starting point for future investigations.
PROCHECK
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