PDBsum entry 5n4e Go to PDB code:  Tunnel analysis for: 5n4e calculated with MOLE 2.0 PDB id 5n4e Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.04 1.23 58.6 -1.82 -0.48 25.1 85 9 5 4 6 3 0 0   2 1.04 1.23 58.9 -1.40 -0.49 18.5 84 6 4 5 8 3 0 0   3 1.03 1.24 61.1 -1.55 -0.69 16.0 88 3 8 8 4 2 0 0   4 1.03 1.25 62.9 -0.22 -0.37 6.4 82 2 2 6 8 3 1 0   5 1.02 1.28 69.8 -0.40 -0.18 13.3 81 4 4 3 7 6 0 0   6 1.03 1.18 77.2 -0.39 -0.17 12.5 84 5 4 5 9 5 0 0   7 1.05 2.98 23.4 0.11 0.08 9.1 69 1 0 1 6 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.