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PDBsum entry 5n0c
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Tunnel analysis for: 5n0c calculated with  MOLE 2.0
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PDB id
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5n0c
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.18 |
1.24 |
261.3 |
-1.49 |
-0.33 |
17.5 |
86 |
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21 |
19 |
30 |
17 |
7 |
3 |
2 |
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2 |
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1.45 |
1.50 |
16.4 |
-0.98 |
-0.64 |
9.2 |
96 |
1 |
1 |
4 |
2 |
0 |
1 |
0 |
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3 |
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1.30 |
1.71 |
15.7 |
0.53 |
0.43 |
14.6 |
69 |
2 |
1 |
0 |
4 |
1 |
2 |
0 |
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4 |
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1.25 |
2.32 |
36.0 |
0.29 |
0.26 |
12.7 |
76 |
2 |
1 |
1 |
6 |
2 |
2 |
0 |
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5 |
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1.32 |
2.81 |
29.6 |
-1.20 |
-0.12 |
10.4 |
84 |
1 |
2 |
5 |
2 |
2 |
2 |
0 |
NGA 3 D GAL 4 D SIA 5 D
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6 |
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1.23 |
1.45 |
16.2 |
-1.04 |
-0.30 |
18.7 |
84 |
1 |
3 |
2 |
3 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program