PDBsum entry 5mql Go to PDB code:  Tunnel analysis for: 5mql calculated with MOLE 2.0 PDB id 5mql Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   11 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.04 1.45 15.5 0.34 0.10 1.9 83 0 0 2 2 3 0 0   2 1.23 2.63 28.5 -0.14 0.30 8.9 74 2 1 1 3 6 0 0   3 1.07 1.07 15.1 0.14 0.04 3.7 77 0 1 3 2 2 0 0   4 1.37 1.37 18.7 -0.30 -0.09 7.1 80 0 1 5 3 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.