PDBsum entry 5mqh Go to PDB code:  Tunnel analysis for: 5mqh calculated with MOLE 2.0 PDB id 5mqh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.17 2.16 28.3 1.90 0.39 0.9 89 0 0 6 9 0 0 0   2 1.26 1.96 28.4 1.92 0.62 2.8 72 0 1 2 8 2 0 0   3 1.25 1.95 33.1 1.61 0.23 2.7 84 0 1 2 11 0 0 0   4 1.25 1.87 23.8 1.00 0.46 13.9 75 3 1 0 8 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.