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PDBsum entry 5ml4

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Tunnel analysis for: 5ml4 calculated with MOLE 2.0 PDB id
5ml4
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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0 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.37 3.93 35.5 1.49 0.80 4.4 70 1 1 2 15 6 0 0  RRQ 201 B
2 1.42 4.52 35.5 1.48 0.65 2.5 70 1 0 1 15 6 0 0  RRQ 201 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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