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PDBsum entry 5ml0
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Tunnel analysis for: 5ml0 calculated with  MOLE 2.0
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PDB id
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5ml0
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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1 tunnel,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.07 |
2.11 |
15.1 |
0.23 |
0.37 |
9.1 |
59 |
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0 |
2 |
0 |
1 |
4 |
0 |
1 |
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P2L 901 A
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2 |
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1.46 |
1.64 |
15.3 |
-0.36 |
-0.05 |
5.2 |
66 |
0 |
1 |
0 |
1 |
3 |
2 |
1 |
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3 |
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2.00 |
2.03 |
15.8 |
-0.09 |
0.06 |
14.2 |
64 |
1 |
2 |
0 |
1 |
3 |
0 |
1 |
P2L 901 A
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4 |
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1.44 |
1.50 |
16.1 |
-0.59 |
0.16 |
8.9 |
65 |
0 |
2 |
1 |
1 |
3 |
0 |
1 |
P2L 901 A
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5 |
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1.42 |
1.49 |
16.8 |
-0.90 |
-0.12 |
14.3 |
71 |
1 |
2 |
1 |
1 |
2 |
0 |
1 |
P2L 901 A
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6 |
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2.00 |
2.03 |
17.1 |
0.12 |
0.11 |
12.5 |
68 |
1 |
2 |
0 |
2 |
3 |
0 |
1 |
P2L 901 A
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7 |
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1.41 |
1.48 |
18.5 |
-0.28 |
0.02 |
4.7 |
70 |
0 |
1 |
1 |
1 |
3 |
2 |
1 |
P2L 901 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program