spacer
spacer

PDBsum entry 5mg0

Go to PDB code: 
Top Page protein ligands metals pores links
Pore analysis for: 5mg0 calculated with MOLE 2.0 PDB id
5mg0
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
1 pore, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.23 1.27 31.5 -0.47 -0.06 9.7 84 2 2 3 5 2 3 0  LBV 401 A
2 1.21 1.30 40.3 -1.40 -0.42 17.1 84 4 2 3 4 1 2 0  LBV 401 A
3 1.68 1.95 42.7 -0.61 -0.21 14.7 84 1 3 1 6 0 3 0  
4 1.55 1.71 47.5 -1.38 -0.34 16.5 87 5 3 3 4 2 1 0  LBV 401 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer