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PDBsum entry 5lhc

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Pore analysis for: 5lhc calculated with MOLE 2.0 PDB id
5lhc
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.54 2.46 40.9 -2.32 -0.25 34.2 81 4 3 3 3 0 0 0  
2 1.55 1.55 41.2 -1.83 -0.63 22.3 85 4 4 4 3 0 0 0  
3 1.52 1.83 41.5 -1.46 -0.20 31.2 73 5 6 1 6 2 0 0  
4 1.67 1.79 47.1 -2.13 -0.43 35.0 76 8 6 2 6 2 0 0  PO4 702 A
5 1.25 1.34 53.9 -2.29 -0.62 28.1 86 7 4 5 2 1 0 0  
6 1.45 1.46 56.5 -1.91 -0.32 24.8 76 5 3 2 2 3 0 0  
7 1.55 1.81 66.6 -1.45 -0.36 23.5 78 7 5 6 7 2 0 0  
8 1.57 1.57 71.7 -2.02 -0.51 27.5 80 9 6 7 8 2 0 0  PO4 702 A
9 1.71 2.00 96.9 -2.74 -0.59 29.8 87 10 6 9 2 1 0 0  PO4 703 A
10 1.46 1.59 105.3 -1.50 -0.40 23.6 79 12 5 7 10 3 0 0  PO4 702 A
11 1.77 1.77 26.9 -0.34 0.08 23.6 79 5 4 1 4 1 0 0  PO4 704 B
12 1.76 1.75 44.0 -1.72 -0.32 28.8 79 7 6 5 6 2 0 0  GOL 701 B GOL 703 B PO4 704 B
13 1.77 1.78 91.7 -1.69 -0.43 22.6 85 10 5 8 6 0 0 0  GOL 701 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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