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PDBsum entry 5l2k
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Tunnel analysis for: 5l2k calculated with  MOLE 2.0
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PDB id
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5l2k
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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0 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.14 |
1.17 |
33.4 |
0.34 |
0.20 |
6.4 |
79 |
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2 |
1 |
4 |
5 |
5 |
0 |
0 |
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6UL 411 A 70E 303 E
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2 |
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1.62 |
4.11 |
35.3 |
2.19 |
0.94 |
1.8 |
66 |
0 |
1 |
0 |
10 |
9 |
0 |
1 |
70E 303 E
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3 |
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1.61 |
4.10 |
39.0 |
1.98 |
0.90 |
3.8 |
68 |
1 |
1 |
0 |
11 |
9 |
0 |
1 |
70E 303 E
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4 |
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1.39 |
1.39 |
39.1 |
1.12 |
0.48 |
4.7 |
73 |
1 |
1 |
0 |
9 |
7 |
0 |
1 |
70E 303 E
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5 |
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1.13 |
1.20 |
40.9 |
-0.10 |
0.05 |
8.5 |
81 |
2 |
3 |
4 |
5 |
4 |
0 |
0 |
6UL 411 A 70E 303 E
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6 |
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1.40 |
1.40 |
42.8 |
0.97 |
0.46 |
6.8 |
75 |
2 |
1 |
0 |
10 |
7 |
0 |
1 |
70E 303 E
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7 |
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1.20 |
1.41 |
45.8 |
1.12 |
0.49 |
3.7 |
74 |
1 |
1 |
0 |
9 |
7 |
0 |
1 |
70E 303 E
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8 |
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1.19 |
1.43 |
49.5 |
1.00 |
0.51 |
5.7 |
76 |
2 |
1 |
0 |
10 |
7 |
0 |
1 |
70E 303 E
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program