PDBsum entry 5kqh Go to PDB code:  Pore analysis for: 5kqh calculated with MOLE 2.0 PDB id 5kqh Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 1.26 28.8 -1.78 -0.22 17.5 68 5 2 2 1 3 0 0   2 1.69 1.69 32.2 -1.78 -0.65 24.8 86 3 4 1 2 1 0 0   3 1.66 1.68 34.4 -0.76 -0.46 10.9 82 2 2 1 3 2 1 0   4 1.36 1.66 39.3 -0.67 -0.14 13.6 85 3 3 2 7 1 1 0   5 1.38 1.70 52.5 -0.81 -0.16 15.5 84 6 3 2 9 2 1 0   6 1.60 3.11 65.8 -1.49 -0.48 22.5 78 6 4 1 7 1 1 0   7 1.21 1.29 81.0 -1.61 -0.48 18.8 80 5 5 3 6 2 1 0   8 1.62 3.27 94.7 -1.49 -0.31 21.7 84 6 6 4 9 1 3 0   9 1.85 2.46 102.1 -1.44 -0.28 20.9 82 9 6 4 11 2 3 0   10 1.39 1.42 144.9 -0.69 -0.18 16.1 86 10 13 10 20 5 4 0   11 0.89 0.85 166.7 -1.70 -0.39 20.2 83 15 9 7 10 4 2 0  MPD 808 A 12 1.20 1.34 165.2 -1.38 -0.30 19.3 83 16 12 6 13 5 4 0  HEM 801 A MPD 807 A 13 1.43 1.47 177.1 -0.94 -0.30 15.0 83 13 8 6 15 4 2 0   14 1.23 1.46 224.5 -0.95 -0.26 15.0 83 14 12 8 19 7 4 0  HEM 801 A MPD 807 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.