PDBsum entry 5kqh Go to PDB code:  Tunnel analysis for: 5kqh calculated with MOLE 2.0 PDB id 5kqh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 1.63 47.3 0.10 -0.20 7.7 89 2 3 2 13 1 1 0   2 1.24 1.20 140.8 -0.57 -0.24 14.2 86 7 9 8 24 6 3 0   3 1.31 2.03 36.4 -0.37 0.24 14.2 77 4 2 2 8 2 1 0  TOX 111 B HEM 801 B OXY 803 B MPD 805 B 4 1.34 2.10 36.6 -0.33 0.30 14.9 78 4 2 2 9 2 1 0  TOX 111 B HEM 801 B OXY 803 B MPD 805 B 5 1.25 1.25 16.2 -1.51 -0.78 8.2 96 0 1 4 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.