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PDBsum entry 5kl6
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Tunnel analysis for: 5kl6 calculated with  MOLE 2.0
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PDB id
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5kl6
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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12 tunnels,
coloured by tunnel radius |
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12 tunnels,
coloured by
tunnel radius
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12 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.91 |
2.00 |
15.3 |
-2.30 |
-0.52 |
29.8 |
73 |
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4 |
1 |
0 |
0 |
1 |
1 |
0 |
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DT 1 C DA 2 C DC 3 C
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2 |
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1.38 |
1.38 |
17.6 |
-2.68 |
-0.72 |
32.7 |
87 |
4 |
1 |
1 |
0 |
0 |
0 |
0 |
DT 1 C DA 2 C DC 3 C
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3 |
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1.52 |
1.56 |
18.4 |
-0.66 |
-0.52 |
13.1 |
81 |
4 |
1 |
1 |
1 |
0 |
0 |
0 |
DG 8 B DC 3 C DC 4 C DC 5 C
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4 |
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1.64 |
1.64 |
19.6 |
-2.40 |
-0.53 |
29.3 |
79 |
4 |
2 |
1 |
0 |
1 |
1 |
0 |
DG 8 B DT 1 C DA 2 C DC 3 C DC 4 C DC 5 C
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5 |
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1.40 |
1.40 |
21.9 |
-2.62 |
-0.69 |
30.7 |
90 |
4 |
2 |
2 |
0 |
0 |
0 |
0 |
DG 8 B DT 1 C DA 2 C DC 3 C DC 4 C DC 5 C
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6 |
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1.52 |
1.57 |
23.6 |
-1.77 |
-0.57 |
24.8 |
85 |
4 |
1 |
1 |
0 |
1 |
0 |
0 |
DG 8 B DC 4 C DC 5 C DC 6 C
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7 |
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1.60 |
1.60 |
27.5 |
-2.34 |
-0.60 |
30.0 |
85 |
4 |
2 |
1 |
0 |
1 |
0 |
0 |
DC 3 C DC 4 C DC 5 C DC 6 C
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8 |
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1.59 |
1.59 |
29.1 |
-2.13 |
-0.61 |
27.4 |
85 |
4 |
2 |
1 |
0 |
1 |
0 |
0 |
DC 3 C DC 4 C DC 5 C DC 6 C
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9 |
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1.18 |
1.26 |
36.1 |
-2.35 |
-0.80 |
30.1 |
92 |
5 |
2 |
2 |
1 |
0 |
0 |
0 |
DG 8 B DC 4 C DC 5 C DC 6 C DC 7 C DA 8 C DC 9 C
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10 |
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1.17 |
1.26 |
40.0 |
-2.69 |
-0.77 |
33.3 |
91 |
5 |
3 |
2 |
1 |
0 |
0 |
0 |
DC 3 C DC 4 C DC 5 C DC 6 C DC 7 C DA 8 C DC 9 C
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11 |
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1.16 |
1.27 |
41.6 |
-2.63 |
-0.75 |
32.4 |
91 |
5 |
3 |
2 |
1 |
0 |
0 |
0 |
DC 3 C DC 4 C DC 5 C DC 6 C DC 7 C DA 8 C DC 9 C
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12 |
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1.20 |
1.46 |
15.1 |
-0.89 |
-0.64 |
12.9 |
87 |
2 |
1 |
0 |
1 |
0 |
0 |
0 |
DG 2 B DC 3 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program