PDBsum entry 5kjs Go to PDB code:  Tunnel analysis for: 5kjs calculated with MOLE 2.0 PDB id 5kjs Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.17 1.35 45.7 0.29 0.25 6.9 70 2 0 1 5 7 3 0  MSE 70 A MSE 151 A 2 1.20 1.38 48.8 0.16 0.15 10.0 81 3 1 2 8 5 1 0  MSE 70 A MSE 151 A 3 1.23 1.37 50.8 0.61 0.31 5.3 71 3 0 2 7 8 2 0  MSE 70 A MSE 151 A MSE 389 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.