PDBsum entry 5kf8 Go to PDB code:  Tunnel analysis for: 5kf8 calculated with MOLE 2.0 PDB id 5kf8 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 2.13 26.0 -1.08 0.30 19.3 62 3 3 0 2 6 2 0  GCS 404 A EP1 405 A 2 1.30 2.09 62.1 -1.19 0.09 21.2 70 4 4 1 2 6 2 0  GCS 404 A EP1 405 A COA 406 A 3 1.18 1.18 20.4 0.26 -0.03 7.2 74 1 1 1 1 2 1 1  ACO 401 A EDO 402 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.