PDBsum entry 5ity Go to PDB code:  Tunnel analysis for: 5ity calculated with MOLE 2.0 PDB id 5ity Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 1.16 21.3 -1.90 -0.68 17.1 77 4 0 2 1 0 0 0  DG 298 F DT 299 F DC 300 F DT 301 F 2 1.43 1.43 22.1 -1.42 -0.64 17.0 75 4 0 0 1 0 0 0  DG 298 F DT 299 F DC 300 F DT 301 F DA 302 F DA 309 F DC 310 F 3 1.15 1.40 21.5 -0.60 -0.21 8.4 85 1 0 6 5 0 1 1   4 1.44 1.44 22.1 -1.48 -0.70 16.4 80 4 0 0 0 0 0 0  DG 298 E DT 299 E DC 300 E DT 301 E DA 309 E DC 310 E 5 1.25 1.25 27.5 -1.45 -0.61 17.6 79 5 0 0 1 1 0 0  DG 298 E DT 299 E DC 300 E DC 310 E DC 311 E DT 312 E 6 1.49 1.53 25.9 -1.34 -0.63 16.1 71 4 0 0 1 1 0 0  DG 298 D DT 299 D DC 300 D DT 301 D DA 302 D DC 310 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.